PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0464s0001.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 342aa    MW: 37638.2 Da    PI: 6.5077
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0464s0001.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.94e-091121491954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+  ++  LA+++gL+ +qV++WF N R +
  Kalax.0464s0001.2.p 112 FEHflHPYPTDVDKHILARQTGLSRSQVSNWFINARVR 149
                          664459******************************88 PP
2BELL61.51.8e-201433072
                 BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                         +++v+ssFea+ag g+a++Y +lA+ka+SrhFrcL+d i++qi
  Kalax.0464s0001.2.p  1 MKAVVSSFEAAAGNGAATVYSALASKAMSRHFRCLRDGIVDQI 43
                         89****************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075263.6E-15139IPR006563POX domain
PROSITE profilePS5007111.77490153IPR001356Homeobox domain
CDDcd000868.46E-1393154No hitNo description
SMARTSM003897.6E-993157IPR001356Homeobox domain
SuperFamilySSF466892.01E-1794160IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.6E-2896160IPR009057Homeodomain-like
PfamPF059204.4E-18110149IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MKAVVSSFEA AAGNGAATVY SALASKAMSR HFRCLRDGIV DQIRATKKAM GEKDDQVALG  60
TTRGETPRLR LLDQTLRQQK AFQQLNMMEC HPWRPQRGLP ERSVSVLRAW LFEHFLHPYP  120
TDVDKHILAR QTGLSRSQVS NWFINARVRL WKPMVEEMYM EEAKEELENP NTSHNLASNS  180
DDNSMPATGN THFEDEKPTH DQLIRIDSDC LSSIINHKTE PPPHTGPTMH HGGSASLQLQ  240
HPFYSGPIEL DFSSYSHGQN LSLAGGVSLT LGLQQHGEAG GVSLAFPSSA AGGSSMFYGG  300
GRESIDDCQT MQYASMMDGD QGQNLPYRNL MGAQLLHDMA G*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A8e-1699156158Homeobox protein Meis1
4xrs_B8e-1699156158Homeobox protein Meis1
5bng_A8e-1699157159Homeobox protein Meis2
5bng_B8e-1699157159Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018852535.11e-149PREDICTED: homeobox protein BEL1 homolog
SwissprotQ388971e-112BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2I4H8R61e-148A0A2I4H8R6_JUGRE; homeobox protein BEL1 homolog
STRINGXP_006476516.11e-148(Citrus sinensis)
STRINGVIT_02s0025g00200.t011e-148(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-93TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]