PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0454s0017.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 184aa    MW: 20328.8 Da    PI: 5.764
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0454s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.3e-122441055
                  AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         +++g+Wv+eIr p++   r r++lg+f  a++Aa+a++ a ++++g
  Kalax.0454s0017.1.p  2 RSWGKWVSEIRQPRK---RSRVWLGTFPNADMAARAHDVASLAFKG 44
                         57**********954...5*******************99888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.8E-25153IPR001471AP2/ERF domain
PROSITE profilePS5103219.203152IPR001471AP2/ERF domain
CDDcd000182.10E-25154No hitNo description
SMARTSM003801.7E-26158IPR001471AP2/ERF domain
PfamPF008473.7E-7243IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-16253IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MRSWGKWVSE IRQPRKRSRV WLGTFPNADM AARAHDVASL AFKGKSAHLN FPHLVPHLPQ  60
PASLLPSHIR AAASKAAAMT HLTSCPPTQV KPADDHSPAE AVMTWSGDQE AQQGSYWNEM  120
GSELVELPSL AGSEALQSCV WDELRIMDSG GWWVWEDMHD IDRFGYLNEV IGSVVVDEDH  180
TGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A397ZUK86e-37A0A397ZUK8_BRACM; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-31ERF family protein