PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0446s0029.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 162aa MW: 18649.8 Da PI: 9.2616 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.2 | 4.1e-14 | 28 | 86 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++++r+ +NRe ArrsR RK+++++eL+ v +L +eN+ + +++ +++++ ++e+ Kalax.0446s0029.1.p 28 RKTKRMHSNRELARRSRTRKQKQLDELTAQVGQLRNENTPIIGSINNTTQHYSDTEAEN 86 689********************************************999999877766 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-8 | 20 | 66 | No hit | No description |
SMART | SM00338 | 2.9E-10 | 24 | 88 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.818 | 26 | 89 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-9 | 28 | 79 | No hit | No description |
Pfam | PF00170 | 2.7E-11 | 28 | 83 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.18E-12 | 29 | 80 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 162 aa Download sequence Send to blast |
MASSSGASPA STLMKNSGLS ETDLLDERKT KRMHSNRELA RRSRTRKQKQ LDELTAQVGQ 60 LRNENTPIIG SINNTTQHYS DTEAENSVLR AQQEELHYRP QYLNQMIGYL TSRITVPYEL 120 HEPYNYTINS NAHGLFNQWH MTYLTQQQRQ PIKASAEMFQ F* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 40 | 47 | RRSRTRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_004289640.1 | 2e-38 | PREDICTED: ocs element-binding factor 1 | ||||
TrEMBL | A0A3Q8TAZ8 | 8e-38 | A0A3Q8TAZ8_DIOKA; Transcription factor bZIP7 | ||||
STRING | XP_004289640.1 | 9e-38 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34590.1 | 3e-34 | G-box binding factor 6 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0446s0029.1.p |