PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0441s0015.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 349aa MW: 38440.8 Da PI: 4.8222 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63 | 6.6e-20 | 68 | 118 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p + r r +lg+f taeeAa a+++a+ +++g Kalax.0441s0015.1.p 68 CDYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTAEEAALAYDEAAIAMYG 118 68*****999.**********8...3.35**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.84E-32 | 68 | 127 | No hit | No description |
Pfam | PF00847 | 8.6E-15 | 68 | 118 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.313 | 69 | 126 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.4E-35 | 69 | 132 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-10 | 70 | 81 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.63E-21 | 70 | 127 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.9E-31 | 70 | 127 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-10 | 92 | 108 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MSTSGNLDKT KTRIRKRTGT KSVAETIAKW KQYNVMLDSE GIPVRRVPAK GSKKGCMKGK 60 GGPENYHCDY RGVRQRTWGK WVAEIREPNR GSRLWLGTFP TAEEAALAYD EAAIAMYGLY 120 ARLNMPDRDT KKEVFEENSK DSSTIVSTCC SGSSSTASNN SDALKEEKLS CGASDNMRRH 180 CQRKLVVPKL ENDARSSNQN LAVPFVMDEA GSKNIEAEAR EDLAVSMDVN QGDGVDEWLQ 240 MQSYSMVELF DAHGLLSEIE NNPLKTDTRQ DEGHPLTDQF SALNSSNTKL VGPVDLSSQP 300 QNPDAGLFEG IDVGLQGNSL DLSFLQPGRQ EDEAQCAFDY TSLFDLDV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 5e-19 | 70 | 128 | 3 | 62 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 2e-31 | DRE-binding protein 2A |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0441s0015.1.p |