PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0401s0007.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 214aa MW: 24151.8 Da PI: 8.7092 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102 | 3.4e-32 | 133 | 191 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+++r ++d+ vv++tYeg H h+ Kalax.0401s0007.1.p 133 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQIQRVSKDEGVVITTYEGFHSHP 191 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.7E-33 | 118 | 192 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.06E-29 | 125 | 192 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.539 | 128 | 193 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-37 | 133 | 192 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.1E-26 | 134 | 191 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
MFMAFDQISN SASSRHVSLA SIIPVSASES QLFKSHMATS SMLAPGLMEM QQQQQQQERG 60 VKRSSLDESS NNNCENNNES GCIDAQSCDS VVGMKQQISN AAAATSDQGV EKEEKRKKKH 120 RYAFQTRSHV DILDDGYRWR KYGQKAVKNN KFPRSYYRCT HQGCNVKKQI QRVSKDEGVV 180 ITTYEGFHSH PTIQNSSDNF EHILTQMNIY NNN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 5e-28 | 123 | 190 | 7 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 5e-28 | 123 | 190 | 7 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010249071.1 | 6e-60 | PREDICTED: probable WRKY transcription factor 75 | ||||
TrEMBL | A0A1E5W1J8 | 3e-58 | A0A1E5W1J8_9POAL; Putative WRKY transcription factor 75 | ||||
TrEMBL | A0A1U7ZM87 | 1e-58 | A0A1U7ZM87_NELNU; probable WRKY transcription factor 75 | ||||
STRING | XP_010249071.1 | 2e-59 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13080.1 | 7e-53 | WRKY DNA-binding protein 75 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0401s0007.1.p |