PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0401s0003.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CAMTA | ||||||||
Protein Properties | Length: 900aa MW: 100256 Da PI: 6.2301 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 149.2 | 1e-46 | 12 | 127 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 +e + rwlk+ e++ i++n e +l+++++++p+sg+++Lyn++++r+fr DG++w+kk+dg+tv E+he+LKv++ve+l+cyYa++een Kalax.0401s0003.2.p 12 REaEVRWLKPAEVYYIIQNCEDRHLQSKSAKKPPSGTFFLYNKRVLRNFRGDGHNWRKKRDGRTVGEAHERLKVDNVEALNCYYARGEEN 101 55589*****************999***************************************************************** PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 ++f+rr++w+L e+++ivlv+yl+v Kalax.0401s0003.2.p 102 SSFRRRSFWMLSGERSHIVLVQYLDV 127 ***********************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 62.948 | 7 | 133 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 1.8E-52 | 10 | 128 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 6.4E-41 | 14 | 127 | IPR005559 | CG-1 DNA-binding domain |
Gene3D | G3DSA:2.60.40.10 | 7.8E-12 | 348 | 436 | IPR013783 | Immunoglobulin-like fold |
Pfam | PF01833 | 1.4E-8 | 350 | 433 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 1.54E-18 | 350 | 434 | IPR014756 | Immunoglobulin E-set |
CDD | cd00102 | 7.77E-5 | 350 | 434 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 1.7E-15 | 549 | 644 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 14.318 | 550 | 642 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.87E-16 | 554 | 644 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 3.82E-15 | 555 | 642 | No hit | No description |
Pfam | PF12796 | 7.7E-8 | 570 | 643 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 0.0014 | 583 | 618 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 9.938 | 583 | 615 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 2700 | 622 | 651 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 11 | 700 | 722 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 1.27E-7 | 700 | 805 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
PROSITE profile | PS50096 | 7.529 | 701 | 730 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.12 | 756 | 778 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.608 | 757 | 786 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0068 | 759 | 777 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 0.0014 | 779 | 801 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.974 | 781 | 806 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 7.2E-5 | 782 | 801 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 900 aa Download sequence Send to blast |
MQSEFDINEL VREAEVRWLK PAEVYYIIQN CEDRHLQSKS AKKPPSGTFF LYNKRVLRNF 60 RGDGHNWRKK RDGRTVGEAH ERLKVDNVEA LNCYYARGEE NSSFRRRSFW MLSGERSHIV 120 LVQYLDVANQ SPGSVSQPSF LLSPPSSLSP GISSATNQEF VSVSGGYDSN INLPSPVSAE 180 IGFEVGISNN MVEVNQASGH LEKQLSLNYE NLNGINSLSS QEGMLNSSNF EGYGMEIANQ 240 VWLDSLLDGS DYAACDGDSG MGRQQTSGRD EDCVSWTDVA NFGEDEQISL ELHEMFPLNT 300 DRFEGPPFSS FTSSQQRNLG YQGKYFETDQ TLIQPQANSN LFIDQNQKFT IRDVSPEWGY 360 SFETTKVIIV GSFLCHPSEH VWTCMFGGIE VPIEIIQEGV ILCEAPPNPS GKVTLCVTSG 420 NRETCSEVRE FEYRNKTGIC AQCSASKKET TMSSEELLLL VRLAQMLICD YSLGQRGGDS 480 KELGNGLSEK RNSDEDSWSL ILESLLVGSG TFAGTIYWLL EEFLKEKLVR WISSKTQEPT 540 GESTCLLSRK EQGIIHMIAG LGYEWALAPI LSSGVGINFR DINGWTALHW AARFGREKMV 600 ACLIASGALA GALTDPNVQD PTGKTAASIA AINGHKGLAG YLSEVALTSH LSSLKLQESE 660 LSKELAVSEA EHTVNCIAEA NMNTTEDQLS LNDTLTAVRN AASAAARIQA AFRAHSFRKR 720 QQEKAFKTIS IDDYGISSDV QVLSAVSKLA FRNTRDHNSA ALSIQKKYRG YKGRKEFLDF 780 RQKVVKIQAH VRGHQTRKNY KVCWAAGILE KIILRWLRKG VGLRGFKPEL ETIDEIDEED 840 FAKVFRKKNV EAALEEAVAR VLSMVASPEA RQQYRRMLER YRQAKAHLGN AANERLQHL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022725126.1 | 0.0 | calmodulin-binding transcription activator 4-like isoform X3 | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | D7TB03 | 0.0 | D7TB03_VITVI; Uncharacterized protein | ||||
STRING | VIT_01s0010g03850.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0401s0003.2.p |
Publications ? help Back to Top | |||
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