PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0388s0045.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 280aa MW: 31025 Da PI: 7.1433 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.3 | 1.3e-31 | 23 | 76 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+ Kalax.0388s0045.1.p 23 PRLRWTPELHSCFVQAIDKLGGQEKATPKLLLQVMDVRGLTISHVKSHLQMYRS 76 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.4E-29 | 19 | 77 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 11.534 | 19 | 79 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.87E-15 | 21 | 78 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.4E-24 | 23 | 77 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.7E-7 | 24 | 75 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MVSCGRGGGA GGGVRQYVRS KVPRLRWTPE LHSCFVQAID KLGGQEKATP KLLLQVMDVR 60 GLTISHVKSH LQMYRSIKSD LSRQVNLNSS DTSKQSFEDH DGDGDADEEQ DDDHNKMTLH 120 HHPSKPTSES DSHFVYNNSV DCINPPKRAR FEMSGSSSVY EEDARVVVHD HRRAGGIIYD 180 TVIISAAGPF SSSSTMLLSQ NPYNRSINAP LGFPVKESNF LQVHATFVAL LSHKKNIFFF 240 SSFFEMGLSV VLALFDPSPH MTELIHIIFH LFGISTHSL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 7e-20 | 24 | 78 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-20 | 24 | 78 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-20 | 24 | 78 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-20 | 24 | 78 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 7e-20 | 24 | 78 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002281928.1 | 3e-51 | PREDICTED: myb family transcription factor APL | ||||
TrEMBL | A0A438CWL0 | 5e-50 | A0A438CWL0_VITVI; Putative Myb family transcription factor | ||||
STRING | VIT_01s0137g00050.t01 | 1e-50 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 6e-30 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0388s0045.1.p |