PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0374s0029.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 410aa MW: 45615.9 Da PI: 9.2385 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.3e-18 | 127 | 177 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge Kalax.0374s0029.1.p 127 LYRGVRQRH-WGKWVAEIRLPRD---RTRLWLGTFDTAEDAAMAYDRQAFKLRGE 177 59******9.**********966...4**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 5.36E-32 | 126 | 185 | No hit | No description |
SMART | SM00380 | 1.5E-38 | 127 | 190 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.879 | 127 | 184 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-23 | 127 | 185 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-31 | 127 | 185 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.2E-12 | 128 | 177 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-11 | 128 | 139 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 6.8E-11 | 150 | 166 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence Send to blast |
MATSSDQNDM DRYGRSPDRQ NPYQFHQGQQ IPLHPSSSAS RSVFPFALDA SQLQFRQQQQ 60 QQHCSIAYYP PQTLQQQQQQ LLNGDLATMG AALTPRHHQM LMMMNRVGVQ QKTSSLLRPQ 120 PINTTKLYRG VRQRHWGKWV AEIRLPRDRT RLWLGTFDTA EDAAMAYDRQ AFKLRGENAR 180 LNFPERFLNK ETLISTAPTS PSSTPARSNP APNSFHKLEE PSKEEEEPDL SQVANNATGA 240 NTNECVADKK EFVWGDMAGA WFNTIPAGWC PGSPISDNLE ATNHLLLLPN PLPSSAFGQH 300 NEIAELSTAC ELRRQLNNLG AAASTSSSSS NSCSFLWKDP HSTSRRQPSS IQTEADARQR 360 RGQALSAVVS ALLSSPRRSS PNQLVAYCPE TPDALLSSRL SPRSIRRPI* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 7e-20 | 126 | 186 | 1 | 62 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 9e-20 | 126 | 186 | 4 | 65 | ATERF1 |
3gcc_A | 9e-20 | 126 | 186 | 4 | 65 | ATERF1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022764049.1 | 1e-75 | ethylene-responsive transcription factor ERF054-like | ||||
TrEMBL | A0A1U8MAV1 | 2e-71 | A0A1U8MAV1_GOSHI; ethylene-responsive transcription factor ERF054-like | ||||
TrEMBL | A0A2P2JFG1 | 5e-71 | A0A2P2JFG1_RHIMU; Ethylene-responsive transcription factor ERF054-like | ||||
TrEMBL | A0A2P5XGY5 | 2e-71 | A0A2P5XGY5_GOSBA; Uncharacterized protein | ||||
STRING | EOX99382 | 6e-71 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20880.1 | 3e-44 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0374s0029.1.p |