PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0362s0025.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 280aa MW: 31012.7 Da PI: 8.9581 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 52.8 | 1.1e-16 | 18 | 109 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ + +L++a ++ +l+rg+l++++W+ev++++ ++++ r+ +qCk++++ ++k+yk +k++++ + s++p++d+l Kalax.0362s0025.1.p 18 CWTEEATSTLVDAWGKRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASASNGALASNWPFYDRL 107 8*************************************988877778889************************99888889*******9 PP trihelix 86 ea 87 +a Kalax.0362s0025.1.p 108 DA 109 85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 3.6E-26 | 16 | 110 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence Send to blast |
MDESSPPPSR PIPVREDCWT EEATSTLVDA WGKRYVELSR GNLRQKDWQE VADAVNARHG 60 HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SASNGALASN WPFYDRLDAL IGPNVKKAVT 120 GGGGGGQVGT PPLPAIRKAG PHASTLPKKR GAAAASMDDS YFRRNYSAVA AAAAAADLDE 180 PEDEEERMED EESERSRSSG DEEGDGDGIK KLAKAIKRFG EIYARVEGEK QRQMVELEKQ 240 RMQFAKELEV QRMQMFMNTQ VQLEKIKRSK GSGSNDLYS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_019419880.1 | 1e-112 | PREDICTED: trihelix transcription factor ASIL1-like | ||||
TrEMBL | A0A1S3VKN2 | 1e-109 | A0A1S3VKN2_VIGRR; trihelix transcription factor ASIL2 isoform X4 | ||||
TrEMBL | V7BTZ9 | 1e-109 | V7BTZ9_PHAVU; Uncharacterized protein | ||||
STRING | XP_007148047.1 | 1e-110 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 1e-63 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0362s0025.1.p |