PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0359s0008.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRF
Protein Properties Length: 498aa    MW: 53702.2 Da    PI: 9.3091
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0359s0008.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC74.21.4e-23173217145
                  WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                          d+epgrCrRtDGKkWRCs+ v  ++k+CE+H+hrgr rsrk +e+
  Kalax.0359s0008.1.p 173 DPEPGRCRRTDGKKWRCSNGVALDQKYCEKHVHRGRPRSRKLVEA 217
                          79***************************************9985 PP
2QLQ47.46e-17115147234
                  QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 
                          +FTaaQ+ +L++Q++++Ky++++ PvP +Ll++
  Kalax.0359s0008.1.p 115 PFTAAQWKELERQAMVFKYMMHSIPVPYDLLLP 147
                          8*****************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009512.6E-9114150IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166617.996115150IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.6E-11115147IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166723.223173217IPR014977WRC domain
PfamPF088794.1E-19174216IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MSMDLCRPFL SGDGSDYDLG VGISGPASNM NRSCMMMMPM NMMGGSGGEI LSHSVAAEAV  60
DVRRKLMLEQ QHHQQLQQQQ QPFDMYAATC GGSVIKSPGN GGMAAAAAAS MGFFPFTAAQ  120
WKELERQAMV FKYMMHSIPV PYDLLLPFIT ATNNDPSGVR RDSHLLRFLK NGDPEPGRCR  180
RTDGKKWRCS NGVALDQKYC EKHVHRGRPR SRKLVEAASS DFNNKSNKKP RLLPQTQPNA  240
PPPAPVSGSQ NGAGTDLKIP RSAAVYTNAA LGNQPSSVPA SLLPQSHPRN NADWSEGQWN  300
RLMAQSKRGD TPERSHYSSA SLYHQQLSLN SYAQFASAHD DSQSKREFEL FLNPDLKKPL  360
MDEAWTANAA STHSGNGLVS LGLSMGHVYN VVDGMSVTEQ GKQPQMGNWL TQSGGPLGEV  420
LRPTVLRPTA TSSPTTAAAS DSCNNKNSPQ VSSSSPSGVL QKAVASHSDS TSHSSQPKSG  480
LQWLSQDKLP SSPGQHV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.19e-35growth-regulating factor 7