PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0358s0015.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRF
Protein Properties Length: 493aa    MW: 53633.5 Da    PI: 7.5888
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0358s0015.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC71.41.1e-22154197144
                  WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                          d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e
  Kalax.0358s0015.1.p 154 DQEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKNRPRSRKHVE 197
                          68****************************************97 PP
2QLQ47.74.8e-1795128235
                  QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 
                          +FT aQ+q+L++Q  +yK L+a+ PvPp+Ll++i
  Kalax.0358s0015.1.p  95 SFTKAQWQELERQTVVYKFLSASIPVPPQLLMPI 128
                          6********************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.2E-1094130IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.10895130IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088804.5E-1395128IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.374154198IPR014977WRC domain
PfamPF088791.4E-18156197IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    Send to blast
MGSDKQAAEC DVGLGLRIQQ MTPSMPLRQQ QQLTSPGFGA GGGGLFDGSA FFRQGGNHAA  60
DDAYNIVGAE TRNTMNYFNS DLPFQSQVPT RGPFSFTKAQ WQELERQTVV YKFLSASIPV  120
PPQLLMPING TQINLAVSHP NRLLNFGLPS NGTDQEPWRC RRTDGKKWRC SRDVAPDQKY  180
CERHAHKNRP RSRKHVELHT PNLTSAPSTS TGNKKNHQLD LKVSSKSVEP RSHIFNQNGP  240
QLSSYPTLAS YDQPRCSFDW FGKGNTTSGD RGSQLWTPIM QPEEGLAGSQ SNNFFKHVST  300
CKRQKDTPMS SNGLGMNLGA QGHNQNDPCG LLLGPKLAFL NDDLNLEQTE MPRGFIDAWS  360
TADGGDSVCK VSHKFSDPSN KTHPISSLTL SMSGGNDANA EERHEHLGIG LMDAEQDSSG  420
LKLQQPMVNW MSTEPWMGST PGGPLAEALC LGISSNLKSV NAHQPSSPYG CSSNTANTKQ  480
QSSSDESSSH GL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272535.32e-92PREDICTED: growth-regulating factor 8
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24150.12e-34growth-regulating factor 8