PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0349s0014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 21462 Da PI: 8.3719 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.1 | 4.4e-18 | 103 | 151 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+W+AeIrdp+ r r++lg+f ta+eAa a+++a+ k++g Kalax.0349s0014.1.p 103 YRGVRQRP-SGKWAAEIRDPR----ReMRVWLGTFETAQEAALAYDRAAVKFHG 151 9*******.7*********82....47************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51257 | 5 | 1 | 30 | No hit | No description |
SuperFamily | SSF54171 | 6.21E-21 | 102 | 159 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.9E-29 | 102 | 158 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.3E-12 | 102 | 151 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.84 | 102 | 159 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.0E-33 | 102 | 165 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.50E-28 | 103 | 158 | No hit | No description |
PRINTS | PR00367 | 1.0E-9 | 103 | 114 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-9 | 125 | 141 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MTRLTPEQEM AAMVASLTHV VTGGYGSTSC NSGPFSAADS ACQICKVVRE CLGCGLSDFA 60 PPFDSGGQPV NEGSAPEVDG EGRNEAGNNG GSKKKRKKNN NNYRGVRQRP SGKWAAEIRD 120 PRREMRVWLG TFETAQEAAL AYDRAAVKFH GLRAKLNFIY PDTSATHCRS APPIAAQAVV 180 IPDQGASANA AEGGAGDGIM GMRG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-20 | 101 | 158 | 4 | 62 | ATERF1 |
3gcc_A | 3e-20 | 101 | 158 | 4 | 62 | ATERF1 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 93 | 97 | KKRKK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2R6RH47 | 4e-39 | A0A2R6RH47_ACTCH; Ethylene-responsive transcription factor |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 3e-28 | related to AP2 6l |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0349s0014.1.p |