PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0341s0043.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 386aa MW: 41621.4 Da PI: 8.6221

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0341s0043.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	6.8e-39	92	152	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk++ Kalax.0341s0043.1.p 92 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTHGGALRNVPVGGGCRRNKRTG 152 56789*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-37	76	150	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.711	96	150	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.1E-33	96	150	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	98	134	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence Send to blast
MVFSSAPLYL DPHNWHVQQQ AQLHHHHQQR QQQNQHLIHG GGDNTHPNHQ IGVQMPPPPP 60 TASQTAGGGV GSSSIRPGSM ADRARQAKIP QPEPGLKCPR CESTNTKFCY FNNYSLSQPR 120 HFCKTCRRYW THGGALRNVP VGGGCRRNKR TGNKTTEAAG SKPVNGEQDN NLNNNNNNNG 180 SISPVISSTM LEESSSLHQP RLAQIPFLAS LQGLAGHYGS PPSSLGLSFS SMMSAAAAQD 240 QLGFQIGGNS NSNNSSGSGS DHQWRPHHFP NFLAGFDPPQ QIPHSSLFQF PVDHSHQSTH 300 PPLRSSVSQQ PARPPDNPAT DHHQQSDEAG AKAEAAAAGQ QGGMNTNLVS RSFLGTSDHS 360 NNNQYWNNST WTDMSGLNSS TTSLL*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence Send to blast

MVFSSAPLYL DPHNWHVQQQ AQLHHHHQQR QQQNQHLIHG GGDNTHPNHQ IGVQMPPPPP  60
TASQTAGGGV GSSSIRPGSM ADRARQAKIP QPEPGLKCPR CESTNTKFCY FNNYSLSQPR  120
HFCKTCRRYW THGGALRNVP VGGGCRRNKR TGNKTTEAAG SKPVNGEQDN NLNNNNNNNG  180
SISPVISSTM LEESSSLHQP RLAQIPFLAS LQGLAGHYGS PPSSLGLSFS SMMSAAAAQD  240
QLGFQIGGNS NSNNSSGSGS DHQWRPHHFP NFLAGFDPPQ QIPHSSLFQF PVDHSHQSTH  300
PPLRSSVSQQ PARPPDNPAT DHHQQSDEAG AKAEAAAAGQ QGGMNTNLVS RSFLGTSDHS  360
NNNQYWNNST WTDMSGLNSS TTSLL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	2e-45	DNA binding with one finger 2.4

Link Out ? help Back to Top
Phytozome	Kalax.0341s0043.1.p