PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0335s0046.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 385aa MW: 41577.4 Da PI: 8.4196 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.5 | 6.8e-39 | 92 | 152 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk++ Kalax.0335s0046.1.p 92 PEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTHGGALRNVPVGGGCRRNKRTG 152 56789*****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 7.0E-37 | 76 | 150 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.711 | 96 | 150 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 9.1E-33 | 96 | 150 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 98 | 134 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MVFSSVPLYL DPHNWHVQQQ AQLHHHHQQR QQQNQHLIHG GGDNTHPNHQ IGVQMPPPPP 60 TASQTAGGGV GSSSIRPGSM ADRARQANIP QPEPGLKCPR CESTNTKFCY FNNYSLSQPR 120 HFCKTCRRYW THGGALRNVP VGGGCRRNKR TGNKTTGAAE SKPVNGEQDN NLNNNNNNNG 180 SISPVISSTM LEDSSSLHQP RLAQIPFLAS LQGLAGHYGS PPSSLGLSFS SMMSAAAAQD 240 ELGFQIGGNS NSNNSNGSGS DHQWRPHRFP NFLAGFDPPQ QIPHSSLFQF PVDHSHQSTH 300 PPLRSSVSQQ PARPPDNPAT DHHQQSDEAG AKAEAAAAGQ QGGMNTNLVS RSFLGTSDHN 360 NNQYWNNSPW TDMSGLNSST TSLL* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00295 | DAP | Transfer from AT2G37590 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37590.1 | 4e-46 | DNA binding with one finger 2.4 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0335s0046.1.p |