PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0333s0055.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 453aa MW: 49475.2 Da PI: 7.3224 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 66.4 | 5.1e-21 | 206 | 257 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k r++Wt eLH++F++a+e++ G++ A+P +il++m+v+ Lt+++v+SHLQk++ Kalax.0333s0055.1.p 206 KRRVNWTAELHNKFIDAIERI-GPN-AVPMEILKVMNVPWLTRANVASHLQKFK 257 689******************.776.**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.2300 | 5.8E-5 | 61 | 93 | No hit | No description |
SuperFamily | SSF52172 | 2.28E-9 | 61 | 130 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 3.6E-7 | 94 | 142 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 2.1E-20 | 203 | 260 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 10.311 | 203 | 261 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.34E-13 | 204 | 261 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.7E-18 | 206 | 258 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence Send to blast |
MPSSQQEQTI AVAADGSSPD ADNKKLDQPG SEKTCEDQDH YLSWDDLADD HAKEIPSFKI 60 DGLRVLAVDD SVVCLKILVA LLKHCKYNVL SADNNQQNIM KAIRYGARDY IIKPPGMAQI 120 KNVWQHVVRK QLFGSGCKDV NNANNSSVTI EETRSPVEDS KRKQTEIEQD DNCDDEMGKT 180 DEEAASAWTG CGNAADGSGA GAAKKKRRVN WTAELHNKFI DAIERIGPNA VPMEILKVMN 240 VPWLTRANVA SHLQKFKNAL RGQTQSAQPA RNVYNSRVNS AAGQSGYQSS LSSASPYSTG 300 TMNYGSSSSA YPVGTSQILP QRFPYHQSNL NPMIQNLGYA NQSQSHTQHY NLPFNPSAYQ 360 APTMLNDAPL LPKNVRPDIQ GHPPVPKFNG LRFPTFGTMN NNNMINSYSV NQPQLPAPTL 420 APSQPTYAYT PAVAPTSVRV ADSQQHGMLT EG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 3e-15 | 203 | 261 | 2 | 61 | ARR10-B |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 203 | 207 | KKKRR |
2 | 203 | 208 | KKKRRV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-30 | response regulator 12 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0333s0055.1.p |