PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0330s0002.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 383aa    MW: 42169.9 Da    PI: 8.7983
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0330s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.59.6e-31212267156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r+ W+++LH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Kalax.0330s0002.1.p 212 KQRRSWSQDLHRRFLHSLQQLGGAHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 267
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.435209269IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.6E-26209270IPR009057Homeodomain-like
SuperFamilySSF466891.54E-16210270IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-26212267IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MEKMQQLDDE YAQALEMERK KMLMFERELP LSIELVSRAI ELQRQRLLSS SVDAGAGGGI  60
HQQHRSDQSS SEETTSDCGP MLEFIPLKKP TCASSSESGE HQQDLNQKDG SSGVDEISGN  120
SGQKSDWLRS VQLWNQTPDL PPNKELGRAG SVGAGKKVTS RDGEEACKPL NEEKSVEKSH  180
RQTNESSTSD TKESQKNGGS RKEDKEGSSQ RKQRRSWSQD LHRRFLHSLQ QLGGAHVATP  240
KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PTPPPSRNNA CNGQAPQFVV LGGIWVPQSD  300
YTTMAVAAER EAKVARGVPR TGVYTPMAAP PAQPHHPWQQ IQFNQKPQTK SKNSEGNGGD  360
GLARCISPSM SSTTRATPSP VC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009356299.13e-91PREDICTED: myb family transcription factor EFM-like
TrEMBLA0A438ECN59e-90A0A438ECN5_VITVI; Transcription factor HHO3
STRINGXP_009356299.11e-90(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-57G2-like family protein