PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0316s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 347aa MW: 37472.6 Da PI: 8.9003 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.8 | 1.1e-38 | 61 | 118 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rk k++ Kalax.0316s0010.1.p 61 APLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKTKQR 118 5789***************************************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 2.9E-33 | 62 | 117 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 6.0E-26 | 63 | 117 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.227 | 63 | 117 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 65 | 101 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
MLSSTTSFDW SQPQMNETTN NSTRPPPPPM SSFQIKTLTA TDGRKLGAAT AADQQAAAAA 60 APLKCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKTKQRVR 120 QPSNKLPHKS GNSHDNGSDQ TTRSHGQMEE PNLGLNGLLY GKNSTNMEIF NGFGASRVTE 180 LDLCNRNSNS SSGYNQIYNL GLGFSTGDYM RNQSNIPTYL SSYSTLFGSN FSSPSCISSA 240 SPLTQSVLGS GFEYEKFVNE PPSSLNKGNM GNFMSVLPLE DMHIGGFGSG MKAEELGKQM 300 KLNQMGSVSS PSMDPSCYNW NNNGAASNVN SWPDAPSFGS SVMSLL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.2 | 3e-33 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0316s0010.1.p |