PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0316s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 300aa MW: 32062.7 Da PI: 9.8889 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 105.7 | 2.5e-33 | 31 | 86 | 6 | 61 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC+s+ntkfCyynnysl+qPr++Ck+CrryWt+GG rnvPvGg+ r+n+++ Kalax.0316s0009.1.p 31 EQCPRCHSRNTKFCYYNNYSLTQPRHYCKTCRRYWTQGGVCRNVPVGGAIRRNNRR 86 58**************************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 27.307 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.3E-29 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-20 | 32 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence Send to blast |
MVIMNFNLNQ NNNLGAGEVE YLVGHGELLG EQCPRCHSRN TKFCYYNNYS LTQPRHYCKT 60 CRRYWTQGGV CRNVPVGGAI RRNNRRVRVG PAGNPLNAVV PRAARRRGRG PNAAAVTAVA 120 GRSLAIAGRN AAVQAEGNRG RIISSAGTNF PSMGTNFPNP IDARYSAFRR TMASHCPLPV 180 VATSASEALN TSNLRLLQEF PANNNFLNNN VSAGFRNFFP PIPPPISGGS AWQQESLFMS 240 SSHNDNMFLW GHDGASGSGS SDGSGSGGGA PAINDMDVTN TTHWTDLPDY SPPPPPSSA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07640.1 | 8e-29 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0316s0009.1.p |