PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0310s0003.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 320aa    MW: 34892 Da    PI: 8.6748
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0310s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822212.88.7e-6641413146
               DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 
                          + r ptw+ErEnnkrRERrRRaiaakiyaGLR +Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+e+++++g sas+sp+s
  Kalax.0310s0003.1.p   4 GPRLPTWRERENNKRRERRRRAIAAKIYAGLRTYGNYQLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPTERMDMIGGSASVSPCS 93 
                          6799************************************************************************************** PP

               DUF822  93 slqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslv 146
                          s+q        +sp++sy++sp sssfpsps++ ++++ +    sl+p+l++ls+ 
  Kalax.0310s0003.1.p  94 SYQ--------PSPCASYNPSPPSSSFPSPSRTPTNTNGKRdaDSLIPWLKNLSSG 141
                          ***........********************9988776554569********9983 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.3E-654139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MPSGPRLPTW RERENNKRRE RRRRAIAAKI YAGLRTYGNY QLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPTERM DMIGGSASVS PCSSYQPSPC ASYNPSPPSS SFPSPSRTPT  120
NTNGKRDADS LIPWLKNLSS GTPSASSELL HRHLQMRRGR GSISAPITPP LSSPTCRTPR  180
MRLDWENGNP GGGSVQPSFF TSSTQATGAQ NQMLPETWLA GFQIFQAPTS PTFSLVSRNP  240
FDIRPEIPNP SGSRMWTPGQ SGVCSPAIPA GHDRTADVPM SDAMASEFAF GDNLNGLVKA  300
WEGERIHEES GSDDLELKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.11e-130PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-116BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF11e-122A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009352718.11e-129(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-103BES1/BZR1 homolog 4