PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0309s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 32476 Da PI: 4.7007 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52 | 1.8e-16 | 86 | 134 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrd + r +r++lg+f+taeeAa+a+ + +++ Kalax.0309s0010.1.p 86 IYKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTAEEAAAAYARKEAEYK 134 69****998.**********77.....45******************88777765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.20E-16 | 85 | 118 | No hit | No description |
SMART | SM00380 | 2.7E-15 | 86 | 135 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.69E-17 | 86 | 135 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 18.716 | 86 | 144 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-10 | 86 | 128 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.6E-21 | 86 | 129 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.4E-10 | 87 | 98 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.4E-10 | 109 | 125 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence Send to blast |
MRPPRGKHVP ETIKKLRVIC SDPYATESDS SSGEEDEFTG GRRRPCKRHV QEILIRDDTN 60 KDEPGKPDDQ KPPGEKFQPK GKSSTIYKGV RRRKWGKFAA EIRDPFRKTR VWLGTFDTAE 120 EAAAAYARKE AEYKKLLAEK RSFSVTTCSP FLTPPRPSSS DDTADFCSLA SPSSVLDVTR 180 PAPPRPDHCR KTWDPCKEDN SFMMEEEELI SAFLKEPVLS PELSSVFDDS KLFESNQYLS 240 GSTPDLLASD GSTDLGQDAD FDGLMDSEFG WGNDDFTWID ETLNVEPST* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 93 | KGVRRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 6e-15 | cytokinin response factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0309s0010.1.p |