PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0284s0034.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 358aa MW: 38046.2 Da PI: 9.1325 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.2 | 1.8e-38 | 62 | 119 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rk k + Kalax.0284s0034.1.p 62 APLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKAKPR 119 5789**************************************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 3.4E-33 | 63 | 117 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-25 | 64 | 117 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.059 | 64 | 118 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 66 | 102 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MLSSTPSSFD WSQPQQMSET TGNPTGPRPA PMSSFQVKAS IDGRKLVGAA TAADQQAAAA 60 AAPLKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKAKPRV 120 RQPSNKLPPV GHRSSHSHDN GPDQTARSGL GQMEEPNLGL NGLPYGKNNG TNMEIFNGFG 180 ASRFTDLDLG TRAANSSMGY SQIQNLGLGF STGEYMRNQS NNSSYLSSYS TLFGSNFSSP 240 SGISPSSSLM RSVLESGDVY ENLKFVNEPP PSVNKGNMGN FLSILPLEDM HIGGNGGGFG 300 SGTKPEELGQ TKLSQMGSLS SPSSMDRPSL YNWDNGASNV NSWSDVPSIG SSVTSLL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 3e-34 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0284s0034.1.p |