PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0284s0033.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 312aa MW: 33566.8 Da PI: 10.7607 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 102.6 | 2.3e-32 | 31 | 86 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr.rknkk 60 +cprC s+ntkfCyynnysl+qPr++Ck+CrryWt+GG rnvPvGg+ r+n++ Kalax.0284s0033.1.p 31 ERCPRCSSRNTKFCYYNNYSLNQPRHYCKTCRRYWTQGGVTRNVPVGGANnRRNRR 86 68********************************************9875266655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 2.0E-15 | 30 | 70 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.2E-28 | 31 | 84 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.972 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MDAMNNDNLN QNNFVAGQGD DQVVLGARLA ERCPRCSSRN TKFCYYNNYS LNQPRHYCKT 60 CRRYWTQGGV TRNVPVGGAN NRRNRRAMVV GAASDPLNVL GPRVPRRRGR GASAAAAAIA 120 AITGRSMAVA GRSVAVQAGG RGRGRIISSM GTYFRQLGTN LPSLGNNYHN PLDARFSAFR 180 RTMASLCPLP LLATSASAAM NASNLSLLQE FAVNHNFMNH HVSLGFGSFP QMPLMHPLPG 240 VGAWQQESLL MSSTRNGHMF LWGYDGASGS GSSDGGWSRG GAPVLNDTDF MNTHWIDDLP 300 DPSPLPPPRS A* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-19 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0284s0033.1.p |