PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0284s0032.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 255aa MW: 27441.2 Da PI: 11.5542 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 103.1 | 1.6e-32 | 31 | 86 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr.rknkk 60 +cprC s+ntkfCyynnysl+qPr++Ck+CrryWt+GG rnvPvGg+ r+n++ Kalax.0284s0032.1.p 31 ERCPRCSSRNTKFCYYNNYSLNQPRHYCKTCRRYWTQGGVTRNVPVGGANnRRNRR 86 68********************************************9875266655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 26.972 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.0E-28 | 31 | 84 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 4.0E-15 | 32 | 70 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MDAMNNNLNQ NNNLVAGQGD YQVVLGARLA ERCPRCSSRN TKFCYYNNYS LNQPRHYCKT 60 CRRYWTQGGV TRNVPVGGAN NRRNRRAMVV GAASDPLNVL SPRIPRRRGR GASAAAAAIA 120 AITGRSMTVA GRSVTVQAGG RGRGRIISSM GTHFRQLGTN LPSLGNNYPN PLDAGFSAFR 180 RTMASLCPLP LLATSASAAM NDSNLSLLQE FAVNHNFMNH QVSLGFGSCP QMPPMHPLPG 240 VGAWQQESLL MSST* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 4e-20 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0284s0032.1.p |