PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0283s0044.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 448aa    MW: 49244.2 Da    PI: 6.8272
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0283s0044.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.5e-31104157255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrW+p+LH +Fv av++LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Kalax.0283s0044.1.p 104 PRLRWSPDLHMCFVLAVQRLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 157
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.904100160IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.1E-29100158IPR009057Homeodomain-like
SuperFamilySSF466891.7E-13102158IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-22104159IPR006447Myb domain, plants
PfamPF002491.9E-7105156IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MASSTEKPTE AAMEIISGDE SYTSSSSRGA KADHSTTYKS SPTVLDLNER ATGGVQEEDN  60
GDCDGDDDNE EGNSTSGNNE DRGGREIRSN GMNTVRQYVR SKMPRLRWSP DLHMCFVLAV  120
QRLGGQERAT PKLVLQLMNV KGLSIAHVKS HLQMYRSKKL DESGQVLSHH QNGPYSHGKH  180
HHQMMEIMCR KGVHTSSHPY AHPHFKMDSS RSGTGSLNNH VEFPSFRQSL SSTRNQNWPV  240
GSNRRWSEDL GLAPGCAPDH EPRASDVSKH FAGPVRQSHF LEKRWTASGL GLNAAYDWDK  300
KHPSDDHQMM NLRSVLSLSN PQTSSTTWSP TTSPMLTTAC LRFKEAVSDS SPTPNLQLSL  360
GHADETETKP SDDPSQRHAK GSSSSSIIDT ALSLSLSPAA TTPKPKADNN GDDQDEEEER  420
IVMKLGNGAS LKWLPARAGN EDEYFRI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-17105159357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-17105159357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-17105159357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-17105159357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-17105159458Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-36G2-like family protein