PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0277s0039.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 379aa MW: 42274.4 Da PI: 5.8618 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 61.9 | 1.1e-19 | 139 | 197 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++W+K Gq k+s+f rsY++C+++ +C ++k v++++e p+ +++tY+g H h+ Kalax.0277s0039.1.p 139 EDVWAWKKNGQNFTKDSPFLRSYFKCSTSeECFARKAVQQTSEVPEKFIVTYTGLHIHP 197 8*************************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.7E-20 | 128 | 199 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 21.93 | 133 | 199 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.42E-18 | 136 | 199 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.0E-18 | 138 | 198 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.7E-17 | 139 | 197 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence Send to blast |
MDNFKYDVHA QIGSSSSSNF SPGESCPFSV SDPTSFFLNV KTEIPFSYPE LDSIFDPQDA 60 ADQFDVFAPP IMKPCTTPSS DITTTTATTA VAAPSPLPKV EKSKARSPSF EEIYKQKLKK 120 KSSKKISSVH EVGDGKQIED VWAWKKNGQN FTKDSPFLRS YFKCSTSEEC FARKAVQQTS 180 EVPEKFIVTY TGLHIHPPPN TENPIRGCYK PLRAKRSMEG GGSSNNASSS SSTMTNQTNN 240 NFALTPVSSD YHFSEMMMYS SEGEVTEETR DDEVEELGED LFLHDDVTGD ASLDLSCRDY 300 VGISKCECRE KRDDSGAKIH QNCLCLYPHL TRSSLYFIVI RTGPDRSDIY ILSRCITNRI 360 DRFLMKSMNR TGHMIGLL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23550.1 | 2e-18 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0277s0039.1.p |