PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0276s0042.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 339aa MW: 37169.5 Da PI: 5.0058 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.9 | 1.1e-17 | 96 | 145 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 s y+GVr++k +g+W+AeIrd + r r++lg+f t+eeA +a+ a +++e Kalax.0276s0042.1.p 96 SVYRGVRQRK-WGKWAAEIRDpF-----RsVRVWLGTFSTPEEASQAYQAKLREYE 145 78*******9.**********66.....56********************999997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.62E-16 | 96 | 144 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.2E-10 | 96 | 145 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 4.38E-21 | 96 | 137 | No hit | No description |
PROSITE profile | PS51032 | 19.111 | 97 | 163 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.5E-16 | 97 | 156 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-21 | 97 | 144 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.8E-10 | 98 | 109 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.8E-10 | 120 | 136 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MSVGGRSVRK VRVIYSDPYA TDSSSDEEDD ARGLVRVAEI RKRVVKEITI PIVGGKRDAV 60 GSGLEKNRSG VTDNRLHAEK KPRSVTQSMS KRPSASVYRG VRQRKWGKWA AEIRDPFRSV 120 RVWLGTFSTP EEASQAYQAK LREYEALGAT VSPTSKKIKT GFNPSAKAKT SHDIGVRKKT 180 ISKTKKAVSV EMKDGSPLSR SYNRAVSEDA ESHASSSHMD DKDNENGCAA ATEVKQPQFL 240 PPPPEMDGLM SGSLDQEIGL GLEFDSFLID DEFSQLFDDF DRSDDALPGN ADGFGSVAAD 300 LLDFDYDVDL NFDGVELSMD LEKLELPCLE ESFNIACP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 9e-20 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0276s0042.1.p |