PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0262s0045.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 352aa MW: 39237.4 Da PI: 4.4703 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.4 | 3.9e-11 | 186 | 229 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++P + K++ +iL +++Y+k+L Kalax.0262s0045.1.p 186 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILADTIDYMKEL 229 589*********************66......****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.326 | 180 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.7E-15 | 184 | 244 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.1E-9 | 186 | 229 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-12 | 186 | 235 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.97E-5 | 187 | 234 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.5E-16 | 187 | 243 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 0.00213 | 277 | 318 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence Send to blast |
MELSQPFLLE EWLAMKRENC STYQTGVEMN EFYTDGWSCD FIDEPQALAA STDAAMGTAA 60 GFALPQMEPY FDVPFSEVYN TLDACFDAPA PAAADQFNLA YEINNGATLL PPIHDQYTSM 120 MDEDFTFFSN DCVELMKEDK HASGCKVEMV QSPNENLGSS TSKMSGGGRE RRNGVKKAGG 180 QPSKNLMAER RRRKRLNDRL SMLRSIVPRI SKMDRTSILA DTIDYMKELL EKVSKLEEEE 240 EEHTEAGPIN KLKELKSSEG QAKNSPKFDV KMGEKDTRID ICCTTRPGLL LTTVNTLEAL 300 GLEIQQCVIS CFNDFSMQAA CSQVSEEQMA LTTEVIKQAL FRNAGYEGRC I* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 195 | ERRRRKRL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. May be involved in the differentiation of stomatal guard cells. {ECO:0000269|PubMed:17088607}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002264407.1 | 1e-107 | PREDICTED: transcription factor bHLH93 isoform X1 | ||||
Swissprot | Q9LSL1 | 3e-73 | BH093_ARATH; Transcription factor bHLH93 | ||||
TrEMBL | A0A060A490 | 1e-105 | A0A060A490_VITRI; Inducer of CBF expression 4 | ||||
TrEMBL | A0A438FBI2 | 1e-105 | A0A438FBI2_VITVI; Transcription factor bHLH93 | ||||
STRING | VIT_00s1312g00010.t01 | 1e-106 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 6e-65 | beta HLH protein 93 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0262s0045.1.p |
Publications ? help Back to Top | |||
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