PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0262s0033.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 366aa MW: 40469 Da PI: 8.8606 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.8 | 8.4e-11 | 87 | 143 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++ r++A+++d s++ rk + g ++ +++Aa+a++ a++k++g Kalax.0262s0033.1.p 87 SIYRGVTRHRWTMRYEAHLWDNSSRRegqARKGRQ-GGYDKEDKAARAYDLAALKYWG 143 57*******************77744454336655.7799999*************98 PP | |||||||
2 | AP2 | 50.9 | 3.8e-16 | 186 | 237 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Kalax.0262s0033.1.p 186 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFPTEEEAAEAYDIAAIKFRG 237 57****************988532...5************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.3E-8 | 87 | 143 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.23E-17 | 87 | 153 | No hit | No description |
SuperFamily | SSF54171 | 5.23E-14 | 87 | 153 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.0E-20 | 88 | 157 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-11 | 88 | 152 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.608 | 88 | 151 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.8E-7 | 89 | 100 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 6.46E-25 | 186 | 247 | No hit | No description |
Pfam | PF00847 | 1.8E-10 | 186 | 237 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-18 | 186 | 247 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.2E-32 | 187 | 251 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.1E-19 | 187 | 246 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.638 | 187 | 245 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.8E-7 | 227 | 247 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
YFSQAAAQLV QTNSGSEVVD SGSLNQVVTV ASHHHQLAEL GVSNCDNSAQ NHQNLNNREL 60 VQVEERSVIA QVDTGRKVSD TFGQRTSIYR GVTRHRWTMR YEAHLWDNSS RREGQARKGR 120 QGGYDKEDKA ARAYDLAALK YWGPTAVTNF PVSNYAKELE EMTSMTKQEF IASLRRKSSG 180 FSRGASIYRG VTRHHQQGRW QARIGRVAGN KDLYLGTFPT EEEAAEAYDI AAIKFRGTNA 240 VTNFEMSRYD VAAITKATLP IGGAVRSLKS PPESEVSLAL NEPRLQNPTN NISFSLTQPL 300 SAIPCGVPFD AVPSLYQHNL YHQLQSSHAA VMAVPEPQTS IGTPTGPINF LPYSGDFYAW 360 PHQSY* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021662718.1 | 1e-149 | AP2-like ethylene-responsive transcription factor AIL6 isoform X2 | ||||
Swissprot | Q6J9N8 | 1e-116 | AIL7_ARATH; AP2-like ethylene-responsive transcription factor AIL7 | ||||
TrEMBL | A0A1R3GDZ8 | 1e-148 | A0A1R3GDZ8_COCAP; Uncharacterized protein | ||||
STRING | EOX91925 | 1e-143 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65510.1 | 1e-118 | AINTEGUMENTA-like 7 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0262s0033.1.p |
Publications ? help Back to Top | |||
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