PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0258s0055.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 211aa MW: 23237.6 Da PI: 7.8085 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 120.7 | 5.4e-38 | 12 | 70 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++lkcprCds+ntkfCyynny+lsqPr++Ck+C+ryWtkGG+lrn+PvGg++rk k+ Kalax.0258s0055.1.p 12 HEILKCPRCDSSNTKFCYYNNYNLSQPRHYCKNCKRYWTKGGTLRNIPVGGASRKITKR 70 6789**************************************************97664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-26 | 8 | 70 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.1E-33 | 14 | 68 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.239 | 15 | 69 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 17 | 53 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MQDPYFNQFP EHEILKCPRC DSSNTKFCYY NNYNLSQPRH YCKNCKRYWT KGGTLRNIPV 60 GGASRKITKR PSSTTTTTTT SSSSSSPSNP KRQTTATTTL ATTEHPVTGT SSAPTALTSQ 120 HHHHHQQQFA GSSADYLMDG LYPRMGVRGF EQMGLDGDQR EVRLADPKVE SDQEMRFGGL 180 ESGDMNCWSG SSDDCPDLAI YTTPGGSGFQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-35 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0258s0055.1.p |