PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0227s0002.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 315aa    MW: 35495.5 Da    PI: 6.2656
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0227s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-19112162155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          ++y+GVr+++ +g+W+AeIrdp     r  r +lg++ taeeAa  +++a+ +l+g
  Kalax.0227s0002.1.p 112 KKYRGVRQRP-WGKWAAEIRDPQ----RrVRLWLGTYNTAEEAAMVYDNAAIQLRG 162
                          59********.**********93....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.73E-33112172No hitNo description
PfamPF008473.2E-13113162IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-22113171IPR016177DNA-binding domain
PROSITE profilePS5103224.25113170IPR001471AP2/ERF domain
SMARTSM003801.5E-38113176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-31113170IPR001471AP2/ERF domain
PRINTSPR003672.1E-10114125IPR001471AP2/ERF domain
PRINTSPR003672.1E-10136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MFNQVKYTEH KEASTIVLHD QSDLPKVLRI SLTDSYATDS SSDEEQLQRS LARRVRVKKY  60
VHEISIKPSG THAENTSENR LPKKCRKLAG KTYNQPSQTQ SKTTIPSRRI EKKYRGVRQR  120
PWGKWAAEIR DPQRRVRLWL GTYNTAEEAA MVYDNAAIQL RGPEALTNFP PHLTPIQQVQ  180
TQKKLESIAT TTSGKDSQSP RVCSPTSVLR FQSESAESQL SETQEDKGKT GILNDFAEEL  240
DSFLHQNDAF NLDFFPDSCI PNDTSFLSQD FGVEDFLMCE PGFGYGSLSS KWGSDDFFQQ  300
DIGDLFGSDP LVAL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-22112170160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023746165.12e-70ethylene-responsive transcription factor CRF2-like
TrEMBLA0A2J6JNU44e-69A0A2J6JNU4_LACSA; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.28e-62cytokinin response factor 2