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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Kalax.0204s0029.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family |
BBR-BPC |
Protein Properties |
Length: 346aa MW: 38790.6 Da PI: 9.4998 |
Description |
BBR-BPC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kalax.0204s0029.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GAGA_bind | 363.8 | 3.3e-111 | 1 | 345 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye........paaslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77
mdd g+re r+++ +y+ + +++ +q+m+++aerda+i+ernlalsekk a+aerd aflqrd+a++ern+a++er
Kalax.0204s0029.2.p 1 MDDGGHREngRHRAdQYKaaqsqwlmQ-----HHQpsMKQIMTIMAERDAAIQERNLALSEKKTAMAERDLAFLQRDNAINERNNAIMER 85
9*****9999****99*9654333331.....3322146*************************************************** PP
GAGA_bind 78 dnkllalllvensla.........salpvgvqvlsgtksidslqqlse....pqledsavelreeeklealpieeaaeeakekkkkkkrq 154
dn+l++l+++e+ ++ +++p+g+q+++g+k++++ qq+ +q ++ +++ r+++++ea ++ a++a +++ ++
Kalax.0204s0029.2.p 86 DNALATLQYRETPMNgdngmsqiqTQCPSGCQISRGVKHLHHPQQHVLddenQQHTEAPYNSRDMDITEAISLSPVASDAAKSRG---NK 172
************999999**999999******************94324677888999999999998887776554444443333...44 PP
GAGA_bind 155 rakkpkekkakkkkkksekskkkvkkesad.er............................skaekksidlvlngvslDestlPvPvCsC 215
r+k+pk+ ++kk +k++ +kvkk s+ ++ k+++k +dl+ln v +D++ +P+PvCsC
Kalax.0204s0029.2.p 173 RTKEPKSVSSNKKVQKNP---NKVKKGSDGfSKhmfgkphewrderdmgsgsddvnkqivvLKSDWKGQDLGLNLVVYDDTIMPPPVCSC 259
455555444443333222...2333333222223466677788999******************************************** PP
GAGA_bind 216 tGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
tG rqCYkWGnGGWqS+CCtt+iS+yPLP ++++r+aR++grKmS+gaf+klL++LaaeG+dl +pvDLkd WAkHGtn+++ti+
Kalax.0204s0029.2.p 260 TGNFRQCYKWGNGGWQSSCCTTSISQYPLPSVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLTKPVDLKDNWAKHGTNRYITIK 345
*************************************************************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MDDGGHRENG RHRADQYKAA QSQWLMQHHQ PSMKQIMTIM AERDAAIQER NLALSEKKTA 60 MAERDLAFLQ RDNAINERNN AIMERDNALA TLQYRETPMN GDNGMSQIQT QCPSGCQISR 120 GVKHLHHPQQ HVLDDENQQH TEAPYNSRDM DITEAISLSP VASDAAKSRG NKRTKEPKSV 180 SSNKKVQKNP NKVKKGSDGF SKHMFGKPHE WRDERDMGSG SDDVNKQIVV LKSDWKGQDL 240 GLNLVVYDDT IMPPPVCSCT GNFRQCYKWG NGGWQSSCCT TSISQYPLPS VPNKRHARVG 300 GRKMSGGAFN KLLSRLAAEG HDLTKPVDLK DNWAKHGTNR YITIK*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |