PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0185s0035.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 461aa MW: 50628.1 Da PI: 6.9531 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.2 | 7.2e-09 | 280 | 327 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Kalax.0185s0035.1.p 280 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 327 8*************************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.14E-17 | 274 | 345 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.89E-11 | 274 | 331 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.8E-17 | 276 | 347 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.663 | 276 | 326 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.0E-6 | 280 | 327 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 5.5E-10 | 282 | 332 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence Send to blast |
MEKELFPWTQ NQNPATYCSP DMSFYTTTSN SNWDHSLDQF ESALSSMVSS PAASATPASA 60 SAGVHLIELI GKLGTISSHS YIPNHIHSAD NSCYTTPINS PPKLNLDQMP AFAADPGFAE 120 RAARFSCFGS RSFNGRIGGS QFPDADMAYN NTQLDGSAKY FPGSASHLDG VHIQDTTTNT 180 NNKLPSDSKE ESSVSQKVQS NEAMGRKRKS APRGKPKETQ SSKAAMESND SDSKRTKSDE 240 NEKGRKSGGH QKQSKDNSKP PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ 300 DLVPGCNKVT GKAVMLDEII NYVQSLQRQV EFLSMKLATV NPRMDSVHME ALLSKEILQS 360 RTTLYPVESS NSASAAFPYA YQTQDPSCLP DATTDSRFCN NSLNNDHLRQ SHHHGLQLPS 420 VDGFCNSATQ VSMWEDELHN VVQMGFGAGS MEPSQMKMEP * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002264969.2 | 1e-135 | PREDICTED: transcription factor bHLH77 | ||||
TrEMBL | A0A438CKQ4 | 1e-134 | A0A438CKQ4_VITVI; Transcription factor bHLH62 | ||||
STRING | VIT_05s0029g00390.t01 | 1e-132 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 2e-86 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0185s0035.1.p |