PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0184s0041.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 411aa MW: 45724.2 Da PI: 9.4107 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.6e-17 | 63 | 122 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g Kalax.0184s0041.2.p 63 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 122 57*******************766644468557*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.42E-17 | 63 | 132 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 6.1E-13 | 63 | 122 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-15 | 64 | 131 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.126 | 64 | 130 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.0E-25 | 64 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-5 | 65 | 76 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.2E-5 | 112 | 132 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence Send to blast |
MDASCSKMGG EGGGGMDASD AVAAANSQLL LYKGLKKAKK ERGSTAKERI SKMPPCAAGK 60 RSSIYRGVTR HRWTGRYEAH LWDKSTWNQN QNKKGKQVYL GAYDDEEAAA RAYDLAALKY 120 WGPGTLINFP VSDYTRDLEE MQTVSREEYL ASLRRKSSGF SRGMSKYRGL SSRWDPSFGR 180 APEYLKNMPY GNEATTNNES VSGFRTESKI DLTNYIKWWG PGRDRPTDCI SRLSDETKPC 240 VDDFSSELKT LESAKPTEPY QMPQLGVSHE RGKYKHFSNS AMSTIFRSAA YKKLLEKVSK 300 QKETSMETEN KSNITKINHG KEIEKRSGPE LENETVTVAP AIGDGSSLQR ILYPFGQVLP 360 APVPTSYNVN PTDSSLWQSL VQTPSIGLPL ASEVTKAETS STYAFFQQHE * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004493482.1 | 1e-169 | AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 | ||||
Swissprot | Q8GWK2 | 1e-129 | AP2L4_ARATH; AP2-like ethylene-responsive transcription factor At2g41710 | ||||
TrEMBL | A0A1S2XRN1 | 1e-167 | A0A1S2XRN1_CICAR; AP2-like ethylene-responsive transcription factor At2g41710 isoform X2 | ||||
STRING | XP_004493481.1 | 1e-166 | (Cicer arietinum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41710.1 | 1e-117 | AP2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0184s0041.2.p |