PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0184s0014.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | SAP | ||||||||
Protein Properties | Length: 460aa MW: 50832.4 Da PI: 6.7874 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 675.1 | 9.6e-206 | 1 | 459 | 1 | 455 |
SAP 1 mssssssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsd 90 msss+ssss++ + + gg+ + ++ psssr+r +n vwpePf+ealatq+ai a+ ++Grlaaa+alan fqvcstwravsrs+ Kalax.0184s0014.1.p 1 MSSSTSSSSEDTDR---DNGGGG--ERDVVVPSSSRPRFSNAVWPEPFVEALATQLAIHACITFGRLAAAPALANFFQVCSTWRAVSRSE 85 55555554443332...222222..346789*********************************************************** PP SAP 91 llwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvde.....dndadal.sCrclalsdkylaaGfadGavrl 174 llw++ltr+iW++ +l r tWr+e+i+rhrta nfrtr+y+++ l+fdp d++ + d+da +Cr+lalsd +laaGf+dGavrl Kalax.0184s0014.1.p 86 LLWHNLTRQIWNVVQLRRPTWRDEFIFRHRTALNFRTRQYAHTILHFDPFDNAAstssaEVDPDARpTCRRLALSDVHLAAGFSDGAVRL 175 ************************************************98765411111344554349********************** PP SAP 175 fdletrlhvstflpqh..rdrlGrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGl 260 f+l+trlhv+t++p r rlGrfs+avsGivis+ srlvfatldGdihv+++ g ++ rra++Gdvv dGalvdf+G++rWwvG+ Kalax.0184s0014.1.p 176 FHLQTRLHVTTLRPLVrpRLRLGRFSSAVSGIVISNegSRLVFATLDGDIHVTTVID-GGTPLRRAHAGDVVRDGALVDFTGCDRWWVGI 264 *************976125689************974579************97755.468***************************** PP SAP 261 yaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssl 350 +aGvp rafhiW++e+eel fvGG ltdPea+ GWhmlt++telvGr+rv++retavaCtslrl+vfdl nqg++l+e+e rrG++v++l Kalax.0184s0014.1.p 265 FAGVPERAFHIWNSESEELLFVGGNLTDPEALIGWHMLTDVTELVGRIRVSSRETAVACTSLRLIVFDLNNQGLILGESEPRRGIVVGAL 354 ****************************************************************************************** PP SAP 351 dasneayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhva 439 d + e+y++vd+rG+atvrrv++++evcrf+ rg qrg+lgC+n+gya ++a+g +rvWe+e+ + yly++ er+g +nal+addrhva Kalax.0184s0014.1.p 355 DDAGEVYMTVDTRGTATVRRVDDMTEVCRFNARGvPQRGLLGCINTGYAFLCAAGAIRVWEVERGG-YLYNFWERIGATNALIADDRHVA 443 **********************************99***************************966.*********************** PP SAP 440 vsssdgtihlldfgaq 455 +s ++ tihl+dfgaq Kalax.0184s0014.1.p 444 ASCDHYTIHLWDFGAQ 459 **************97 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF81383 | 1.16E-7 | 65 | 116 | IPR001810 | F-box domain |
Gene3D | G3DSA:1.20.1280.50 | 8.4E-6 | 66 | 133 | No hit | No description |
SuperFamily | SSF50998 | 5.41E-13 | 149 | 456 | IPR011047 | Quinoprotein alcohol dehydrogenase-like superfamily |
Gene3D | G3DSA:2.130.10.10 | 8.4E-12 | 160 | 239 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene3D | G3DSA:2.130.10.10 | 8.4E-12 | 302 | 456 | IPR015943 | WD40/YVTN repeat-like-containing domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0009554 | Biological Process | megasporogenesis | ||||
GO:0009908 | Biological Process | flower development | ||||
GO:0030163 | Biological Process | protein catabolic process | ||||
GO:0046622 | Biological Process | positive regulation of organ growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 460 aa Download sequence Send to blast |
MSSSTSSSSE DTDRDNGGGG ERDVVVPSSS RPRFSNAVWP EPFVEALATQ LAIHACITFG 60 RLAAAPALAN FFQVCSTWRA VSRSELLWHN LTRQIWNVVQ LRRPTWRDEF IFRHRTALNF 120 RTRQYAHTIL HFDPFDNAAS TSSAEVDPDA RPTCRRLALS DVHLAAGFSD GAVRLFHLQT 180 RLHVTTLRPL VRPRLRLGRF SSAVSGIVIS NEGSRLVFAT LDGDIHVTTV IDGGTPLRRA 240 HAGDVVRDGA LVDFTGCDRW WVGIFAGVPE RAFHIWNSES EELLFVGGNL TDPEALIGWH 300 MLTDVTELVG RIRVSSRETA VACTSLRLIV FDLNNQGLIL GESEPRRGIV VGALDDAGEV 360 YMTVDTRGTA TVRRVDDMTE VCRFNARGVP QRGLLGCINT GYAFLCAAGA IRVWEVERGG 420 YLYNFWERIG ATNALIADDR HVAASCDHYT IHLWDFGAQ* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_028093942.1 | 0.0 | transcriptional regulator STERILE APETALA | ||||
Swissprot | Q9FKH1 | 1e-167 | SAP_ARATH; Transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A498H913 | 0.0 | A0A498H913_MALDO; Uncharacterized protein | ||||
STRING | XP_009343485.1 | 0.0 | (Pyrus x bretschneideri) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G35770.1 | 1e-157 | SAP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0184s0014.1.p |
Publications ? help Back to Top | |||
---|---|---|---|
|