PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0183s0061.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Nin-like | ||||||||
Protein Properties | Length: 918aa MW: 100971 Da PI: 6.246 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 88.9 | 4.2e-28 | 598 | 649 | 1 | 52 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+le+l+++Fs+++kdAAk+Lgvc+T+LKriCR+ GIkRWP+Rkik++ Kalax.0183s0061.1.p 598 AEKTITLEVLQRHFSGSLKDAAKSLGVCPTTLKRICRNQGIKRWPSRKIKKV 649 589***********************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.893 | 588 | 669 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 3.5E-25 | 601 | 649 | IPR003035 | RWP-RK domain |
SuperFamily | SSF54277 | 4.58E-23 | 818 | 907 | No hit | No description |
PROSITE profile | PS51745 | 24.337 | 820 | 903 | IPR000270 | PB1 domain |
SMART | SM00666 | 3.4E-24 | 820 | 903 | IPR000270 | PB1 domain |
Gene3D | G3DSA:3.10.20.240 | 1.6E-22 | 821 | 900 | No hit | No description |
CDD | cd06407 | 1.19E-37 | 822 | 902 | No hit | No description |
Pfam | PF00564 | 2.7E-17 | 822 | 901 | IPR000270 | PB1 domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 918 aa Download sequence Send to blast |
MLRLGSNIIM DDGNLSPAAI HGPSFASDMD FDYMNELLGD GCWLETVQGS DFLPQCPSDS 60 NNLLNSPFHL WSPSDTFLGE NIFGQPEESS QERSSLPGGA SLVESQKGTS AKIQKPEQEL 120 GSLADCSSQP SYRIDEAESG KRWWIGPRAT AGPKISVMER LVRAISYMKD SSKDRDVLIQ 180 IWVPMDLNGR RVLTTNDQPY IVDSSSSSLA SYRSISLNFQ FSAEKDSNMT EGMPGRVFLD 240 KVPEWTPDVR FFRSDEYARV GFAQTFNVRG TLALPVFERG SQTCLGVIEV VSTKQKVKAE 300 LDSVCQALQA VDLSSTESQS NDKAKKCIQS YHAALPEILE VMKSACLTHK LPLAQTWMPC 360 VQQGKEGCRY TIENYAHCVS TVDSACYVAD PNVQGFQEAC SEHHLLRGQG VAGKAFTTNE 420 PCFFDDITSF CKTEYPLSHH ARMFRLHAAV AIRLRSVHTG AADFVLEFFL PADCREPEDQ 480 KKMLASLSLI IQETCNSLRV VTDDELAKDA ITSMSASVEG VGAPMTNNEM STRSGSVIDQ 540 SRNVAPFIQK EEPGEFNYGR FAVIQSNLPG SSSLDYNTFG EGNFKDFDRA GDKKRTKAEK 600 TITLEVLQRH FSGSLKDAAK SLGVCPTTLK RICRNQGIKR WPSRKIKKVG HSLEKLQRVI 660 DSVQGPSGTF QIGSFYSNFP ELASPSCKSG ITNQFSASKL STLPKSSTLQ LEGNASSPPT 720 QSLSPSSSCS QSSSSSHSCS SGRMDKTSSG NSTRSEDAAV KEKADEGVLK RMRSDAQLNE 780 KGHDDPKLLP RSRSHVTLCG TPDNESLPPL QKISVKESEG TRVKVTYGDD KIRIRMQNHW 840 QLQDLRQEIA RRFHVEGSSE MQLKYLDDDS EWVLLTCDAD WEECVDLCLS ASSNTIKLSL 900 HAPPHHLGSS LVSSSPP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010663967.1 | 0.0 | PREDICTED: protein NLP4 | ||||
Refseq | XP_010663969.1 | 0.0 | PREDICTED: protein NLP4 | ||||
TrEMBL | A0A438ETN8 | 0.0 | A0A438ETN8_VITVI; Protein NLP2 | ||||
STRING | EOY15260 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35270.1 | 0.0 | Nin-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0183s0061.1.p |