PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kalax.0174s0023.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 364aa MW: 38872.8 Da PI: 8.5638 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 124 | 5e-39 | 64 | 122 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+s Kalax.0174s0023.1.p 64 EQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTS 122 6889****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 7.0E-26 | 64 | 120 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.1E-33 | 65 | 121 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.506 | 67 | 121 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 69 | 105 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 364 aa Download sequence Send to blast |
MLQELLLGGG SSSTTTSPAY SGGEVKALIS NNINGGIIAE VTTTKNPSHD NSNNGSNNNN 60 SNLEQNLRCP RCDSSNTKFC YYNNYNLTQP RHFCKTCRRY WTKGGALRNV PIGGGCRKNK 120 TSFTSALPSV SKSTITGKPK AYSSSADLLL KSGLGNYGLQ DPQDQSSLHH PHHHPLLWSS 180 SPHQPQASHL LAFLRSTQNL NPSDHSHFMS SSPHQSIDQS GFTALNLLNS QTPLSGLDYP 240 SIGVCNSMLR NNNQPSTHHQ QLGGVDPNSR MHELYQRLKL STTGNTNSYS GGGGIEDSHA 300 HVLLGNRVVS ASSSPTSTSN NALDSVPVTM GGGSDLGLWN IPAAYSTWTN DHLPATTNGA 360 CPF* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1R3K4S2 | 2e-60 | A0A1R3K4S2_9ROSI; Zinc finger, Dof-type |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-34 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kalax.0174s0023.1.p |