PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0174s0017.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 302aa    MW: 34381.6 Da    PI: 7.5286
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0174s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.7e-32170225156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W+peLH+rFv+a++qLGG e+AtPk+i+++m v+gLt+++vkSHLQkYRl+
  Kalax.0174s0017.1.p 170 KQRRCWSPELHQRFVDALKQLGGFEVATPKQIRDVMRVEGLTNDEVKSHLQKYRLH 225
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.49E-17168228IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28169228IPR009057Homeodomain-like
PROSITE profilePS5129410.152169227IPR017930Myb domain
TIGRFAMsTIGR015571.3E-25170225IPR006447Myb domain, plants
PfamPF002495.3E-7172223IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDPGPTHDFL KIAPPVDDPP RRKLQGLADY LAGLEAERRK VEAFERELPL CLGLLNDAVE  60
RFREELRKCR EAVDRSFDKV RGPNSEYDDD DRKNWMSSVQ LWNHHPEDSS EFNSSSSNLD  120
LMIGGCFGDG ISLNQLCGEN VRNPGKELIN ESKRQKRIQH QQAQQLVCRK QRRCWSPELH  180
QRFVDALKQL GGFEVATPKQ IRDVMRVEGL TNDEVKSHLQ KYRLHFRKAP SPPMPATSNG  240
PTASRDDQLS IRLHSKSHSM YSPQGPLGRN SAMLDEGGDE ENEGHSWRNR VIFRPACMPT  300
C*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A6e-15170223154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-15170223154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-15170223154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-15170223154Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.15e-43G2-like family protein