PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0172s0077.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 26061.2 Da PI: 9.1162 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.7e-17 | 92 | 139 | 3 | 54 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 ykGVr++k +g+++AeIrd + r +r++lg+f+taeeAa a+ + +++ Kalax.0172s0077.3.p 92 YKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTAEEAADAYRRKEIEYK 139 9****998.**********77.....45******************99888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 18.439 | 91 | 149 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-17 | 91 | 140 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.4E-15 | 91 | 140 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-21 | 91 | 137 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 2.24E-20 | 92 | 131 | No hit | No description |
Pfam | PF00847 | 5.3E-11 | 92 | 137 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-10 | 92 | 103 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.0E-10 | 114 | 130 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRTRPGKRY VQEILIRGDG 60 KSERNKQNEI VQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FRKTRVWLGT 120 FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV 180 LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 98 | KGVRRRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 5e-24 | cytokinin response factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0172s0077.3.p |