PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0164s0067.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 268aa MW: 28719.4 Da PI: 9.3493 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122 | 2e-38 | 14 | 72 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCdstntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rk++++ Kalax.0164s0067.1.p 14 QTSLSCPRCDSTNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGSRKSHSK 72 56789**************************************************9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-24 | 11 | 69 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.1E-33 | 16 | 71 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.761 | 17 | 71 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 19 | 55 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence Send to blast |
MGYVMDQKKH EHRQTSLSCP RCDSTNTKFC YYNNYSLSQP RHFCKACKRY WTRGGTLRNV 60 PVGGGSRKSH SKRVRKPSSS SIPHHPPPSS ASSSHLADHA LALPSPSVAG ASNTLAPLFY 120 GTVDLSGGGR YEDLMRGSGY SDMNDISNSN DGFLSGYNSP LLAPPLGSGS ALALAGGGRG 180 ASSQQGHQLL QRVFPFQPSG ASASGGQLLI DPQAQTWNTD SHHVDQHRHQ HQHQQQPRSD 240 DRGHDSSSAY WAGGGGRSDN LASWPPD* |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU966121 | 2e-34 | EU966121.1 Zea mays clone 291888 hypothetical protein mRNA, complete cds. | |||
GenBank | KJ727686 | 2e-34 | KJ727686.1 Zea mays clone pUT5625 C2C2-DOF transcription factor (DOF34) mRNA, partial cds. |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28310.2 | 2e-31 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0164s0067.1.p |