PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0152s0038.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 312aa MW: 33250.5 Da PI: 10.2313 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 102.6 | 2.3e-32 | 31 | 86 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr.rknkk 60 +cprC s+ntkfCyynnysl+qPr++Ck+CrryWt+GG rnvPvGg+ r+n++ Kalax.0152s0038.1.p 31 ERCPRCSSRNTKFCYYNNYSLNQPRHYCKTCRRYWTQGGVTRNVPVGGANnRRNRR 86 68********************************************9875266655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-15 | 30 | 70 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.2E-28 | 31 | 84 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.972 | 31 | 85 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 33 | 69 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence Send to blast |
MDAMNNNLNQ NNNLVAGQGD YQVVLGARLA ERCPRCSSRN TKFCYYNNYS LNQPRHYCKT 60 CRRYWTQGGV TRNVPVGGAN NRRNRRAMVV GAASDPLNVL GPRIPRRRGR GASAAAAAIA 120 AITGRSVAVA GRSVTVQAGG RGRGRIISSM GTHFRQLGTN LPSLGNNYPN PLDAGFSAFR 180 RTMASLCPLP LLATSASAAM NASNLSLLQE FAVNHNFMNH HVSLGFGGCP QMPPMHPLPG 240 VGAWQQESLL MSSTRNDHMF LLGYDGASGS GSSDGRWPGG GAQVSNDIDF MNTQWIDDLP 300 DCSSLPPPAS A* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60200.1 | 1e-19 | TARGET OF MONOPTEROS 6 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0152s0038.1.p |