PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0152s0037.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 357aa MW: 37948.1 Da PI: 9.3081 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.2 | 1.7e-38 | 61 | 118 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rk k + Kalax.0152s0037.2.p 61 APLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKAKPR 118 5789**************************************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF02701 | 3.4E-33 | 62 | 116 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 1.0E-25 | 63 | 116 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.059 | 63 | 117 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 65 | 101 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MLSSTTSSFD WSQPQMSETT GNPTGPRPAP MSSFPVKASI DGRKLVGAAT AADQQAAAAA 60 APLKCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG GCRKAKPRVR 120 QPSNKLPPVG HRSSRSHDNG PDQTARSGLG QMEEPNLGLN GLPYGKNNGT NMEIFNGFGA 180 SRFTDLDLGT RVANSSMGYS QIQNLGLGFS TGEYMRNQSN NSSYLSSYST LFGSNFSSPS 240 GISPSSSLMR SVLEPGDVYE NLKFVNEPPP SVNKGNMGNF LSILPLEDMH IGGNGGGFGS 300 GTKPEELGQT KLSQMGSLSS PSSMDRPSLY NWDNGASNVN SWSDVPSIGS SVTSLL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 1e-33 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0152s0037.2.p |