PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0150s0052.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 282aa MW: 31656.8 Da PI: 8.5509 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 116.4 | 1.1e-36 | 54 | 113 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC s++tkfCy+nny+++qPryfC++C+ yWt GG++rn+PvG+grrk+k+s Kalax.0150s0052.1.p 54 PDKIIPCPRCASMDTKFCYFNNYNVNQPRYFCRKCQMYWTSGGTMRNLPVGAGRRKSKSS 113 7899*****************************************************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-27 | 42 | 111 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.8E-30 | 56 | 112 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 26.748 | 58 | 112 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence Send to blast |
MWESPTPSIL SGESSCNLLD WQRSSGGVSS CGDWGTNEEQ KSDAARQDKT LKKPDKIIPC 60 PRCASMDTKF CYFNNYNVNQ PRYFCRKCQM YWTSGGTMRN LPVGAGRRKS KSSAPQHQQM 120 EVPFQPHMML FPAPLWPPFP WNPAQYNYPL PSQINYRAGF PGPFYPMYTG CATPRSWNAP 180 LSVHPSPPSL ESEPKSPTLG KHLRDDIDNA TRPGNIDTGE WQIEENLKPP IWVAKTVRID 240 NPAEAAKNSM WVTLGIKNDN IVLSNGKGHF NLFSSLETER S* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015582505.1 | 3e-67 | cyclic dof factor 2 isoform X3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62430.1 | 2e-42 | cycling DOF factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0150s0052.1.p |