PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0141s0057.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 440aa    MW: 49100 Da    PI: 6.8377
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0141s0057.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.8e-093674041954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+++e+  L++++gL+++qV++WF N R +
  Kalax.0141s0057.1.p 367 FEHflHPYPTESEKLILSSQTGLSKNQVSNWFINARVR 404
                          554459******************************88 PP
2BELL103.21.9e-33229300172
                 BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          e+qel+ k +kL+slleeV+ rY++y++q+q v+ssFe +ag gsa+ Yt lAl+a+SrhF +L dai +qi
  Kalax.0141s0057.1.p 229 EKQELHLKFTKLVSLLEEVESRYERYCHQMQEVVSSFELIAGAGSARCYTGLALQAMSRHFFSLSDAILSQI 300
                          689*******************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.0E-32163298IPR006563POX domain
PfamPF075261.6E-35169296IPR006563POX domain
SMARTSM003891.3E-8348412IPR001356Homeobox domain
CDDcd000863.10E-10348409No hitNo description
Gene3DG3DSA:1.10.10.602.6E-26353414IPR009057Homeodomain-like
SuperFamilySSF466894.11E-17354415IPR009057Homeodomain-like
PfamPF059207.6E-17365404IPR008422Homeobox KN domain
PROSITE profilePS5007111.596367408IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MVSQNTPSSS GILHHFIASD PNPSQTQLNQ RLDAYISAMR CNDAFPQPPP AGLPSIQSLG  60
ERMSRSIDLV RPPTMAEDSE ISHTRHLVDL LGTNTPETGH QAQRLSLSLG SQMLLSQSQY  120
RQRSYNHDLV SPRYSISSDE AREGGYSPGA VGQASDHYAY SPSSLVNTVR GSKYLKAVQS  180
LLQEVVNTSD YEAGWDDYGK KLSVRGRRAA RLSSELSTEM CSNGFLSDEK QELHLKFTKL  240
VSLLEEVESR YERYCHQMQE VVSSFELIAG AGSARCYTGL ALQAMSRHFF SLSDAILSQI  300
HLTKKKMYQD SPRLSSGASQ LTLFDQEGKH NRLTLQQIGL LHGQRQAWRP IRGLPETSVV  360
ILRAWLFEHF LHPYPTESEK LILSSQTGLS KNQVSNWFIN ARVRLWKPMI EEMYKEEFAD  420
SDSDPLGTSG GGGTPHFEE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A9e-16354412563Homeobox protein Meis2
3k2a_B9e-16354412563Homeobox protein Meis2
4xrm_A9e-16354412563Homeobox protein Meis2
4xrm_B9e-16354412563Homeobox protein Meis2
4xrs_A6e-16354411158Homeobox protein Meis1
4xrs_B6e-16354411158Homeobox protein Meis1
5bng_A9e-16354412159Homeobox protein Meis2
5bng_B9e-16354412159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002281033.11e-169PREDICTED: BEL1-like homeodomain protein 11
RefseqXP_010664732.11e-169PREDICTED: BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-102BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLE0CQI91e-167E0CQI9_VITVI; Uncharacterized protein
STRINGVIT_18s0001g13130.t011e-168(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-104BEL1-like homeodomain 11