PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0132s0013.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 411aa MW: 44912.3 Da PI: 6.8685 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.8 | 5.2e-10 | 226 | 273 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + sk Ka +L + ++Y++sLq Kalax.0132s0013.1.p 226 SHSLAERVRREKISERMKYLQELVPGC----SKITGKAGMLDEIINYVQSLQ 273 8**************************....899*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.45E-10 | 220 | 277 | No hit | No description |
SuperFamily | SSF47459 | 1.03E-16 | 220 | 291 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.0E-16 | 222 | 290 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.599 | 222 | 272 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.9E-7 | 226 | 273 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-9 | 228 | 278 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence Send to blast |
MMLHCVNTSG GVSGGAELSV LERQRAHMKW QQQQQGLEYG NVHSVLPGYG GVGNQVQGQV 60 CGDSGVGQVG FPVVKPETGL DGTWTGFGNY GMPSVEDFMS CGYEDNSGAE YSYQMMNKAS 120 CPVEISEGRG SILSGRTNLG DAEGAKKRKA ENPASLKAVA DNGTKEKKIK EHNQTQDKRA 180 KTSINSKSKN KREASADASK DNPKVPEVQK TDYIHVRARR GQATDSHSLA ERVRREKISE 240 RMKYLQELVP GCSKITGKAG MLDEIINYVQ SLQRQVEFLS MKLATVNPQL NFSIGSLFGK 300 EVFGPCTSSY PTLGKLSEMA NTAYAQFSHL EEAVSPGLDL GNYQPDMGLQ RQLPETYVDP 360 TSFNQIQQNP STWDAELQSL LAMEFQGRST SYPTQLFTGF TEASNLKMEI * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007199864.1 | 1e-117 | transcription factor bHLH63 isoform X1 | ||||
TrEMBL | A0A2R6Q5T8 | 1e-120 | A0A2R6Q5T8_ACTCH; Transcription factor bHLH63 like | ||||
STRING | EMJ01063 | 1e-116 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 8e-57 | cryptochrome-interacting basic-helix-loop-helix 1 |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0132s0013.1.p |