PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0131s0023.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 371aa    MW: 41442.5 Da    PI: 5.751
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0131s0023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57396.62.4e-30136228597
               DUF573   5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                          rlws eDe+++L G++d+k+ktg++p  ++ afy+++k+s+++ v +sql +Kir+LK+K++ + +k ++g+  +f ++h+ +++e+s+k
  Kalax.0131s0023.1.p 136 RLWSPEDELMILTGMLDYKEKTGVDPNLNLLAFYNYIKGSLNASVDQSQLKNKIRKLKDKYRANAHKEATGQTHVFVRSHEAEAYEHSRK 225
                          9***************************************************************************************** PP

               DUF573  95 iWg 97 
                          +Wg
  Kalax.0131s0023.1.p 226 LWG 228
                          **8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045047.5E-26136228IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MPRNRLPASA NPPDESQSEE DGDEEGQADG GAGNRHEDKS DEEAESEGDS SSVKTMSQVR  60
GLDKDESDGD SGNTFPSPTA SDFVIKQNLR PEMKKRPPPD SDLKEVNKKK MSKKNNCFGV  120
GAEDDDKGKK SGGGLRLWSP EDELMILTGM LDYKEKTGVD PNLNLLAFYN YIKGSLNASV  180
DQSQLKNKIR KLKDKYRANA HKEATGQTHV FVRSHEAEAY EHSRKLWGDQ TMSRGPQLTK  240
SKPKRENEFG IVQNELESVL ALPVTQLEVD TKIVKGCSDK LVGRAGKHVP KMMHLDETDL  300
KTKYATISMP SMIDNFMVKK GLELIEKSKL DDLNEKWNKY QIDAAELYVK RLELEQEHIK  360
LIGEALKGDF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25650.12e-18DNA-binding storekeeper protein-related transcriptional regulator