PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0130s0016.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Dof
Protein Properties Length: 471aa    MW: 50304.1 Da    PI: 7.4362
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0130s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.81.2e-38128187261
               zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                          ++k+l+cprC+s +tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s
  Kalax.0130s0016.1.p 128 PDKILPCPRCNSLDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGSGRRKSKSS 187
                          68999****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074781.0E-26125177IPR003851Zinc finger, Dof-type
PfamPF027017.7E-32130186IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.798132186IPR003851Zinc finger, Dof-type
PROSITE patternPS013610134170IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MALLRDPTIK LFGKTIPLPF PNIAAPAPTE LSADCSEAGE SGGVAQVEVA DDQSSREVEE  60
VGAFDAKKYV VEVEADDHQG ESSNKGLVDG SASSGIIDLE GLADEGLKNR DHGDETTSVA  120
DGRTLKRPDK ILPCPRCNSL DTKFCYYNNY NVNQPRHFCK NCQRYWTAGG SMRNVPVGSG  180
RRKSKSSGGA ICRQVLVSEA ALHSGQCGES NGVLKFGSDA PLCDSMANVL NLAENGENCC  240
QMGGKCHRNA DKGPSKVNSS CSNLVEKGNE GRSVAKNFQG YPIQVPCYPG PPWPIPWNPA  300
MPPPHVGLAG YPVQFYSMQN CWSSGMMGAW IHQRPISSPS STGSLLSSPS SSPSSPRLGK  360
HSRDGEMINV TNKSDGGVEA KASRGIWIPK TLRIDDPSQA AKSSIWETLG IQNEKSSING  420
SGIFKSFPQK DGSCGNSKVP ERPHHMHTNP AALSRSQNFH ETTSVNHTST *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_008221604.11e-115(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.25e-42cycling DOF factor 2