PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0128s0048.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | STAT | ||||||||
Protein Properties | Length: 701aa MW: 78022.1 Da PI: 6.1817 | ||||||||
Description | STAT family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | STAT | 162.4 | 9.7e-51 | 211 | 331 | 1 | 120 |
STAT 1 ldvvllnalgqp.vekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfei 89 +dvvll+a+g+p ++ d+evvasLlyad+g++ve + daea LL+s+dGvef+s d+ +kl +G+asf lk+sqLsskcdnrLfrikf i Kalax.0128s0048.1.p 211 VDVVLLDAFGHPaMNNDIEVVASLLYADTGAPVETPFDAEAALLTSCDGVEFASGDKLIKLQNGHASFNLKMSQLSSKCDNRLFRIKFFI 300 69********983689************************************************************************** PP STAT 90 pklkkypfleavskpirCisrsrntrssslt 120 p+ +ypf+e++s pir +srsrn+r ++++ Kalax.0128s0048.1.p 301 PNSGSYPFFETYSPPIRSVSRSRNSRILTRI 331 *************************988765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF49899 | 1.38E-5 | 78 | 164 | IPR013320 | Concanavalin A-like lectin/glucanase domain |
SuperFamily | SSF55550 | 3.2E-9 | 599 | 684 | IPR000980 | SH2 domain |
Gene3D | G3DSA:3.30.505.10 | 3.6E-7 | 601 | 684 | IPR000980 | SH2 domain |
PROSITE profile | PS50001 | 11.205 | 603 | 684 | IPR000980 | SH2 domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 701 aa Download sequence Send to blast |
MASTHARDYC ALKDLTWQID PGAAGFCFWL YLSESTPLPA TLIRQVRPDA ASPLLSLDER 60 KRPLLWPLLF EHEDSPRSSD TASGEQAQYT AGETEYPLGR WVHVGCEVSS GFLLLHIDGN 120 IVIEKLLSSS DSGSGTLKKV FLHGANDNLV DGYICNMEIL FSTRLIKEQY VKEPPHQLSI 180 DFQCTSDVDE DDEGIWNIVG GKPTGRRTFT VDVVLLDAFG HPAMNNDIEV VASLLYADTG 240 APVETPFDAE AALLTSCDGV EFASGDKLIK LQNGHASFNL KMSQLSSKCD NRLFRIKFFI 300 PNSGSYPFFE TYSPPIRSVS RSRNSRILTR ISKKSSSVVH ANGSQSPRTD DVCLKIPQHA 360 VHGAVAFKPT KRVKCLEGKS SMIIQHHPVP GGSDEEVHSP AKFDSQVTDA SRTLTGEPSR 420 LNETDVCQSD SESTEEESLE SKGMSGSRKH FTDPCVFKYC LGGLEERANI LKELALSASD 480 QDLKDFAQKV SMYSGCSHHW TQIAITKKLI GQGTRFWNMM SQQNEPVCWE NVVFEIRKQF 540 MKIARTTRSL SDQDLSFLRR VSGCQGYVAQ ENFEKMWSWL YPVAYTLSRS GINSLWGSTL 600 PNWIEGFITK EEAELSLQGS RGLQQPGTFI LRFPTSRTWP HPDAGNLVVT YVGSDCTLHH 660 RLISLDYIYS LSGDKNANSL QDMILREPEL SQLGRVIRSQ * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010644056.1 | 0.0 | PREDICTED: uncharacterized protein LOC100260583 isoform X2 | ||||
TrEMBL | A0A251PL13 | 0.0 | A0A251PL13_PRUPE; Uncharacterized protein | ||||
STRING | XP_008226365.1 | 0.0 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78540.1 | 1e-172 | SH2 domain protein B |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0128s0048.1.p |