PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0127s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 18771 Da PI: 4.6453 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.1 | 2.5e-19 | 8 | 56 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +grWv+eIr+p gk++r++lg+f tae+Aa a++ a+++l+g Kalax.0127s0010.1.p 8 YRGVRKRR-WGRWVSEIREP---GKKTRIWLGSFETAEMAAMAYDVAALYLRG 56 9****887.**********8...557*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.1E-38 | 7 | 70 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 7.19E-23 | 7 | 65 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.92 | 7 | 64 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.8E-32 | 7 | 65 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.88E-31 | 8 | 66 | No hit | No description |
Pfam | PF00847 | 2.4E-13 | 8 | 56 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-10 | 8 | 19 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-10 | 30 | 46 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MSSSMTMYRG VRKRRWGRWV SEIREPGKKT RIWLGSFETA EMAAMAYDVA ALYLRGQDAR 60 LNFPELAGTL PCPRSSSAED IRAAAQEAYT FWSQKEERDQ RAGECSSSGL ARVGLSESQI 120 RAINESPLDS PKMWMQMGGG GAMFFDNNDA MMTDEMEHDD DFSLWD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-17 | 8 | 64 | 6 | 63 | ATERF1 |
3gcc_A | 1e-17 | 8 | 64 | 6 | 63 | ATERF1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00227 | DAP | Transfer from AT1G71450 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011000047.1 | 6e-59 | PREDICTED: ethylene-responsive transcription factor ERF021-like | ||||
Swissprot | Q9C9I2 | 9e-44 | ERF21_ARATH; Ethylene-responsive transcription factor ERF021 | ||||
TrEMBL | A0A0D2SET9 | 6e-56 | A0A0D2SET9_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.005G116500.1 | 1e-56 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33760.1 | 2e-32 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0127s0010.1.p |