PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kalax.0125s0017.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 285aa MW: 31614.1 Da PI: 9.4002 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 115.7 | 1.9e-36 | 52 | 111 | 2 | 61 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 k++al+cprC+stntkfCyynny+ +qPry+CkaCrryWt+GG+lrnvPvGg++rk++k Kalax.0125s0017.1.p 52 KDHALNCPRCNSTNTKFCYYNNYNPTQPRYLCKACRRYWTQGGTLRNVPVGGSSRKKNKP 111 67899***************************************************9875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-23 | 50 | 110 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.7E-32 | 54 | 110 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 27.894 | 56 | 110 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 58 | 94 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
MDAAQWPKVL VYDFHKEIGL IEGSSGDNTA SNSSSLHSKQ DKNKKTRPPP NKDHALNCPR 60 CNSTNTKFCY YNNYNPTQPR YLCKACRRYW TQGGTLRNVP VGGSSRKKNK PSPIPSHFNS 120 NKLFLDLNPK QTNMLSNFSA PAPPTRGLMH ESQDADMGLY YANAHHFLPI PPTFEISAAS 180 QGALSPYHAP ISEANTRLLY PSSGFHFQDI IKPTLNLCMD EGGGATHHDR SHMGSTGRIP 240 YHFGDLKQAS ATSSQNNNVS DQSNGRTRDS DNSLLYWNKH GLYN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 2e-33 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kalax.0125s0017.1.p |