PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0123s0015.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 474aa MW: 51321.6 Da PI: 5.7191

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0123s0015.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.4	6.3e-38	111	169	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +ek ++cprC s ntkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+g+rknk+ Kalax.0123s0015.1.p 111 PEKVIPCPRCSSFNTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGKRKNKQ 169 78999****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-28	102	168	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-31	113	169	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.416	115	169	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	117	153	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence Send to blast
MSEVRDPPIK LFGADIHFPE TSPSSDDADL LIPSPSESAA DSCQITRGQC EILSPIREPV 60 KYDGPPSTSH SEERKRIGPA AGDSVNKDGA LKDDQCVETD PDSQEKVLKK PEKVIPCPRC 120 SSFNTKFCYF NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGKRKNKQL PLQYNQVATS 180 SEGVAQADSL VSSSHLVQPN LSLSIPLTSV DGNDETGICE SMVSMFSQND PRTVELGSIR 240 AADEPSSSIS SISSTSLNEL ELPNQETSQF KSSGLYYGST PSIPLPYYTN PQWTYPWVPV 300 ACWKQPVEPI QTVPVPMEDA PLKCTPGISF PVIPYLGCIP VFNGSALTVP LAGCSEHPSL 360 PSATDCSYTS SSSPNLGKHL RETNVSTEEK TENCLWVPKS KKIDDMDTAA KCSILNSLGL 420 NPGKNKSIPK AGVFKAFQPK PESSKHSKTE DTAPVLKANP AALSRSQTFQ ENT*

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence Send to blast

MSEVRDPPIK LFGADIHFPE TSPSSDDADL LIPSPSESAA DSCQITRGQC EILSPIREPV  60
KYDGPPSTSH SEERKRIGPA AGDSVNKDGA LKDDQCVETD PDSQEKVLKK PEKVIPCPRC  120
SSFNTKFCYF NNYNVNQPRH FCKNCQRYWT AGGTMRNVPV GAGKRKNKQL PLQYNQVATS  180
SEGVAQADSL VSSSHLVQPN LSLSIPLTSV DGNDETGICE SMVSMFSQND PRTVELGSIR  240
AADEPSSSIS SISSTSLNEL ELPNQETSQF KSSGLYYGST PSIPLPYYTN PQWTYPWVPV  300
ACWKQPVEPI QTVPVPMEDA PLKCTPGISF PVIPYLGCIP VFNGSALTVP LAGCSEHPSL  360
PSATDCSYTS SSSPNLGKHL RETNVSTEEK TENCLWVPKS KKIDDMDTAA KCSILNSLGL  420
NPGKNKSIPK AGVFKAFQPK PESSKHSKTE DTAPVLKANP AALSRSQTFQ ENT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-55	cycling DOF factor 3

Link Out ? help Back to Top
Phytozome	Kalax.0123s0015.1.p